genomeannotation / transvestigator

Validates transcriptome and prepares it for submission to the NCBI
MIT License
3 stars 1 forks source link

Read RSEM information, display in a table #7

Closed bruab closed 9 years ago

bruab commented 9 years ago

Read transcript fasta, transdecoder gff and RSEM.isoforms.results, output something like

transcript_id     number_of_CDSs     contains_complete_CDS     TPM     FPKM     IsoPct