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genomehubs / goat-data

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Fungal genome sizes are missing #45

Closed rjchallis closed 1 year ago

sujaikumar commented 1 year ago

Thanks for spotting this. Found the source of the error! It is happening because the genome_size attribute in sources/genomesize_karyotype/FILE_www_zbi_ee_fungal_genomesize_20210319.types.yaml had type long and didn't have the right function. I've fixed it now to:

  genome_size:
    header: "1C in Mbp"
    function: "{} * 1000000"
    separator:
      - ","
      - "(?<!e)-"
    type: long
sujaikumar commented 1 year ago

This has been fixed as of 2023.06.26 - thanks!