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genometools
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genometools
GenomeTools genome analysis system.
http://genometools.org
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Build time issue with GenomeTools 1.5.9
#1038
yuwanziaaa
closed
4 months ago
5
Sorry to bother, this just is one of those things that irks me
#1037
elliotberry
closed
4 months ago
1
remove web apps from repo
#1036
satta
closed
8 months ago
0
Add Python bindings required for GFF3 web validator
#1035
satta
closed
8 months ago
0
fixes for Mingw and new zlib version to prevent compiler warnings
#1034
stefan-kurtz
closed
8 months ago
0
restrict clang complaints on older external code
#1033
satta
closed
8 months ago
0
Clang build fixes
#1032
stefan-kurtz
closed
9 months ago
0
Fixed lines resulting in compiler errors for gcc-13-2
#1031
stefan-kurtz
closed
9 months ago
0
New build warnings on GCC 13 turned errors are blocking builds
#1030
satta
closed
8 months ago
1
Cleanup
#1029
satta
closed
9 months ago
0
Update website with new site structure
#1028
satta
closed
9 months ago
0
fix tests on newer distributions
#1027
satta
closed
9 months ago
0
make `errorcheck`/`-Werror` optional
#1026
satta
closed
9 months ago
0
Fails to build on macOS Ventura / Xcode 14.x
#1025
iMichka
closed
9 months ago
3
-Werror is for CI + developer only
#1024
dschwoerer
closed
9 months ago
4
sketch all non-overlapping genes on one track
#1023
paristzou
closed
1 year ago
4
gt gff3 loss of intergenic regions
#1022
edinatale
opened
1 year ago
1
gtlua: check for leaf property in `remove_leaf()`
#1021
satta
closed
1 year ago
0
Assertion error: gt_feature_node_remove_leaf
#1020
haessar
closed
1 year ago
2
gff3validator "Sequence Ontology" out of date?
#1019
rzelle-lallemand
closed
1 year ago
3
LtrPipeline: GenomeTools failed to run ltrharvest. Error code: 139
#1018
panpandzf
closed
1 year ago
4
Add GitHub-based release workflow
#1017
satta
closed
1 year ago
0
error: ignoring return value of 'fwrite', declared with attribute warn_unused_result [-Werror=unused-result]
#1016
ShirelyI
closed
1 year ago
3
fix quicksort segfault
#1015
satta
closed
1 year ago
0
unify Python bytes/string handling
#1014
satta
closed
1 year ago
0
support BED files with zero length blocks
#1013
satta
closed
1 year ago
1
bed_to_gff3 bug
#1012
yumisims
closed
1 year ago
9
After installation, how to use and test whether the function is normal?
#1011
DaShaCHun123
closed
1 year ago
4
How to test whether the GenomeTools library is installed properly
#1010
Wenmj201582
closed
1 year ago
1
Install error: cairo.h: No such file or directory on RedHat 7
#1009
zhilianghu
closed
1 year ago
2
We need to run tirvish two times for a single genome?
#1008
xiekunwhy
closed
1 year ago
1
There is no -retainids when using ltrdigest, Why don't add one?
#1007
xiekunwhy
opened
1 year ago
2
Prepare for release 1.6.3
#1006
satta
closed
2 years ago
0
ensure validity checks for orphan nodes
#1005
satta
closed
2 years ago
1
fix error handling flow
#1004
satta
closed
2 years ago
1
implement less efficient but correct -sortlines
#1003
satta
closed
2 years ago
0
Difficulty extracting intronic regions
#1002
kd-lab
closed
2 years ago
2
gt gff3 -sortlines fails on particular gff
#1001
cmdcolin
closed
2 years ago
11
Running LTRharvest/digest with parallel
#1000
JulieDaz
closed
1 year ago
5
Aborted (core dumped) with LTR harvest
#999
xiaoxiaonao
opened
2 years ago
5
gt gff3 -sort error
#998
cassondranewman
closed
2 years ago
2
Remove conda badge from readme
#997
holmrenser
closed
2 years ago
2
undefined reference to `fcntl64'
#996
jingydz
closed
2 years ago
1
Aborted (core dumped) with LTR digest
#995
omar-almolla209
opened
2 years ago
6
Conda installation requires python2.7
#994
holmrenser
closed
2 years ago
10
gt ltrdigest: error: invalid HMM file
#993
ZhijianZhou01
opened
2 years ago
1
illegal uppercase attribute
#992
BRNiu
closed
2 years ago
3
deduplicate roots before joining
#991
satta
closed
2 years ago
0
Assertion failed when reading GFF
#990
AlexWeinreb
closed
2 years ago
4
Improve portability of test usage
#989
brook-milligan
closed
2 years ago
3
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