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genomic-medicine-sweden
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Twist_Solid
Pipeline for Solid tumours
https://twist-solid.readthedocs.io
GNU General Public License v3.0
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fix: Multiqc rna
#515
jonca79
opened
8 hours ago
0
fix(cnvkit_batch): fix input variable name to match wrapper
#514
jonca79
opened
13 hours ago
0
fix(report_fusion): fix div by zero
#513
jonca79
opened
1 day ago
0
feat: vep 113 and AlphaMissense
#512
jonca79
opened
1 day ago
0
fix: jumble output is dependent on design bed name
#511
jonca79
opened
4 days ago
0
chore: release 0.15.1
#510
github-actions[bot]
closed
5 days ago
1
chore: dev to master
#509
jonca79
closed
5 days ago
0
fix: update cnv_sv module
#508
jonca79
closed
5 days ago
0
docs: update documentaion
#507
jonca79
closed
5 days ago
0
fix: correction of output text for 1p19q
#506
jonca79
closed
1 week ago
0
chore: dev to master (correct md5sums)
#505
jonca79
closed
2 weeks ago
0
test: update of md5sums for jenkins
#504
jonca79
closed
2 weeks ago
0
chore: dev to master
#503
jonca79
closed
2 weeks ago
0
test: update of md5sums for jenkins
#502
jonca79
closed
2 weeks ago
0
chore: update to released versions of modules
#501
jonca79
closed
2 weeks ago
0
chore: release 0.15.0
#500
github-actions[bot]
closed
2 weeks ago
1
chore: dev to master
#499
jonca79
closed
2 weeks ago
0
test: update jenkins test files for develop
#498
jonca79
closed
3 weeks ago
0
test: update jenkins test files for develop
#497
jonca79
closed
3 weeks ago
0
fix: source relative to Snakefile
#496
jonca79
closed
3 weeks ago
0
feat: make sample_mixup_configurable
#495
jonca79
closed
3 weeks ago
0
fix: rm insert size from rna multiqc
#494
jonca79
closed
3 weeks ago
0
refactor: cleanup code
#493
jonca79
closed
3 weeks ago
0
fix: update rna multiqc report for new version of multiqc
#492
jonca79
closed
3 weeks ago
0
fix: FusionCatcher liftover fail crashes report
#491
jonca79
closed
3 weeks ago
0
fix: bugfix of version crash when pipeline runs over several days
#490
jonca79
closed
3 weeks ago
0
feat: AF rna fusion filter possibility
#489
jonca79
closed
4 weeks ago
0
feat: updated ENC hotspot files
#488
jonca79
closed
4 weeks ago
0
fix: handle missing ID-SNPs
#487
jonca79
closed
1 month ago
0
feat: added cnv caller jumble
#486
jonca79
closed
3 weeks ago
0
docs: corrected purecn documentation
#485
jonca79
closed
1 month ago
0
Missing pureCN PoN for novaseq on figshare
#484
jonca79
opened
2 months ago
0
feat: Added an FP-flag to the html report
#483
jonca79
closed
4 weeks ago
0
fix: update requirement to fix panda dependency bug
#482
jonca79
opened
4 months ago
0
feat: rm CDH1 from reporting of cnv deletions
#481
jonca79
closed
4 months ago
0
feat: updated multiqc for version info
#480
jonca79
closed
1 month ago
0
feat: rm noisy MUC6 from cnv VAF plot
#479
jonca79
closed
4 months ago
0
feat: Flag false positive cnvkit small cnvs in tsv-report
#478
jonca79
closed
4 weeks ago
0
feat: add cytobands to cnv report
#477
jonca79
closed
4 months ago
0
chore: dev to master
#476
Smeds
closed
4 months ago
0
test: jenkins test md5sums for main test
#475
jonca79
closed
4 months ago
0
chore: release 0.14.0
#474
github-actions[bot]
closed
4 months ago
1
test: corrected develop cov_and_mut md5sums
#473
jonca79
closed
4 months ago
0
test: Update cnv checksums
#472
jonca79
closed
4 months ago
0
test: updated md5sums for jenkins cnv
#471
jonca79
closed
4 months ago
0
fix: update ENC hotspots
#470
jonca79
closed
4 months ago
0
feat: update common container to new hydra
#469
jonca79
closed
4 months ago
0
fix: correct reference files
#468
jonca79
closed
4 months ago
0
ci: make jenkins fetch design and pon files
#467
Smeds
closed
4 months ago
0
chore: dev to master
#466
jonca79
closed
4 months ago
0
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