Karolinska University Hospital has requested implementation of Nextstrain in sc2Reporter.
They often use Nextstrain in extended manual analyses for SARS-CoV-2 samples and would find it very useful to have this automated in sc2Reporter.
Information
Nextstrain uses augur for building phylogenetic trees and visualize them with auspice. More information can be found in the augur and auspice manuals. There is information here on how to set up auspice on your own server.
Description
Karolinska University Hospital has requested implementation of Nextstrain in sc2Reporter.
They often use Nextstrain in extended manual analyses for SARS-CoV-2 samples and would find it very useful to have this automated in sc2Reporter.
Information
Nextstrain uses augur for building phylogenetic trees and visualize them with auspice. More information can be found in the augur and auspice manuals. There is information here on how to set up auspice on your own server.
This can be closed when