Closed fwa93 closed 6 months ago
Filtlongs parameter for minimum quality is a scale between 0-100 apparently but still based on phred score. https://github.com/rrwick/Filtlong/issues/14 So default should be changed from 12 to a higher value.
Solved in https://github.com/genomic-medicine-sweden/gms_16S/commit/0720bae6ed97332668db0faf64676d42708b4665
fwa93
commented
6 months ago
Filtlongs parameter for minimum quality is a scale between 0-100 apparently but still based on phred score. https://github.com/rrwick/Filtlong/issues/14 So default should be changed from 12 to a higher value.