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genomic-medicine-sweden / jasen

Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.
https://jasen.readthedocs.io/en/latest/
GNU General Public License v3.0
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Bonsai installation #293

Closed hrydbeck closed 4 months ago

hrydbeck commented 4 months ago

The commando : "docker-compose exec api bonsai_api index" gives the error: "pydantic_settings.sources.SettingsError: error parsing value for field "allowed_origins" from source "EnvSettingsSource"

mhkc commented 4 months ago

Please open an issue on the Bonsai repo, https://github.com/Clinical-Genomics-Lund/bonsai/issues