genomic-medicine-sweden / jasen

Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.

https://jasen.readthedocs.io/en/latest/

GNU General Public License v3.0

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297 add nanopore test data #337

Closed Emkago closed 3 months ago

Emkago commented 3 months ago

Description

Added long-read ONT data from S. aureus for easier testing and development of Nanopore track.

Summary of the changes made:

Primary function of PR

[ ] Hotfix
[x] Minor functionality improvement
[ ] Major functionality improvement / New type of analysis
[ ] Backward-breaking functionality

Testing

Pipeline has successfully finished with provided test data.

Sign-offs

[ ] Code reviewed by @octocat
[ ] Code tested by @octocat