Graph Comparison and Coarse Data Fitting

genophenoenvo / docker

List of Docker images used in analyses

GNU General Public License v3.0

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Graph Comparison and Coarse Data Fitting #23

Closed rbartelme closed 4 years ago

rbartelme commented 4 years ago

[x] Compare graph structures from issues #20 and #22
[x] Fit data to graphs from issues #20 and #22
[x] Troubleshoot manually encoded DAG, too many parent nodes to fit data to graph.

~- [ ] Export graph structure and data fit for Shiny app test input~

rbartelme commented 4 years ago

Need to fix manually encoded DAG to eliminate parent node problems. Edited the list to reflect this work.

rbartelme commented 4 years ago

Fixed manually encoded DAG to a much more complex graph structure with more even distribution of node parents/children. Ran into issues with the Kubernetes Cluster and parallel for fitting the data to the graph. Pushed graph changes to github.

Outputs will be addressed in Shiny issues in the next sprint, those issues are edited accordingly.

rbartelme commented 4 years ago

Graph comparison results in bayesian network code as comments.