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genotoul-bioinfo
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dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
http://dgenies.toulouse.inrae.fr
GNU General Public License v3.0
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align/plot job: waiting uploads are 100% until they start
#77
pbordron
opened
11 months ago
0
grammar of batch file
#76
pbordron
opened
11 months ago
0
doc: job states diagram
#75
pbordron
opened
11 months ago
0
annotation: track files
#74
pbordron
opened
11 months ago
0
Batch syntax: Cannot disable an enable by default option
#73
pbordron
opened
11 months ago
0
Break jobs into small tasks
#72
pbordron
opened
11 months ago
0
Use pyfastx instead of biopython
#71
pbordron
opened
11 months ago
1
Config files not copied correctly when installing with `pip`
#70
pbordron
opened
11 months ago
0
Update on config files
#69
pbordron
opened
11 months ago
1
Packaging
#68
pbordron
opened
11 months ago
1
Reduce code complexity of job management
#67
pbordron
opened
11 months ago
0
Rework DB access
#66
pbordron
opened
11 months ago
0
CD/CI
#65
pbordron
opened
11 months ago
1
API for call dgenies from another service/program
#64
pbordron
opened
11 months ago
0
Run dgenies from cli
#63
pbordron
opened
11 months ago
1
Tests
#62
pbordron
opened
11 months ago
0
Windows executable for version 1.5
#61
sanyalab
opened
1 year ago
1
Dgenies with command
#60
bijendrabio
closed
11 months ago
6
Launch map analysis dispay on standalone version
#59
jeramiahsmith
closed
1 year ago
3
between assemblies chromosomal comparison
#58
chklopp
opened
1 year ago
0
Allow to use either query or target as input in ava mode
#57
pbordron
opened
1 year ago
0
Add Cancel ability
#56
pbordron
opened
1 year ago
1
Add batch statistics to month analytics
#55
chklopp
closed
1 year ago
1
Add comments in the batch file
#54
chklopp
closed
1 year ago
1
Regarding running time takes to generate the dot plot
#53
Upendra19993
closed
1 year ago
3
Only the last contig reversal is taken into account in the modify query fasta
#52
chklopp
closed
1 year ago
0
Adding information to the result email
#51
chklopp
closed
1 year ago
1
CVE-2007-4559 Patch
#50
TrellixVulnTeam
closed
1 year ago
0
use secure_filename for sanitize form data
#49
pbordron
opened
2 years ago
1
What does repeatedness mean?
#48
Nonodayo
closed
2 years ago
2
Add query and reference to the job monitoring page in batch mode
#47
chklopp
opened
2 years ago
0
Provide user the command line used for alignment
#46
pbordron
closed
1 year ago
1
Add swapped chromosome background colors to image
#45
chklopp
closed
11 months ago
1
D-Genies try to send email when asking for Query fasta file in webserver mode when `send_mail_status = False`
#44
pbordron
opened
2 years ago
0
HTTP errors 405 "METHOD NOT ALLOWED" because of "Werkzeug"
#43
Bjoernsen
closed
2 years ago
2
Database creation failed on first run if launched with more than 1 worker
#42
pbordron
opened
2 years ago
0
mis-orientation in the reference based contig organisation produced by dgenis
#41
chklopp
closed
2 years ago
0
Plot alignment doesn't specify required file suffix .idx
#40
conchoecia
closed
2 years ago
2
Improve chromosome name display
#39
chklopp
opened
2 years ago
0
Venv python bin path is not right in crontab when launched with mod_wgsi
#38
pbordron
closed
11 months ago
1
Ability to customize parts of web interface
#37
pbordron
opened
2 years ago
0
minimap2 key must exists in tools.yaml
#36
pbordron
opened
2 years ago
0
dgenies clear in cluster mode
#35
pbordron
closed
2 years ago
0
Slurm default native_spec
#34
pbordron
closed
2 years ago
0
Website is possibly down
#33
DustinSokolowski
closed
2 years ago
2
Stuck at 'Uploading files...' when a form field is missing at first try
#32
pbordron
closed
2 years ago
2
Question: D-GENIES settings for minimap2 and mashmap
#31
cabbagesofdoom
closed
2 years ago
3
Relax requirement constraints
#30
pbordron
closed
2 years ago
0
Python 3.10 is not supported
#29
pbordron
closed
2 years ago
0
enabling multiple queries using a query command file
#28
chklopp
closed
11 months ago
0
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