search

geodynamics / axisem

AxiSEM is a parallel spectral-element method to solve 3D wave propagation in a sphere with axisymmetric or spherically symmetric visco-elastic, acoustic, anisotropic structures.
66 stars 31 forks source link

Problem compiling #69

Closed cerinunn closed 3 years ago

cerinunn commented 3 years ago

Hi, I'm having a problem compiling the solver.

Running: make SOLVER/axisem gives me the following error:

mpif90 -g -fbacktrace -fbounds-check -frange-check -pedantic -Dinclude_mpi -Dsolver -c commpi.F90 mpif-sizeof.h:66.41: Included at mpif.h:63: Included at commpi.F90:48:

  CHARACTER, DIMENSION(1,1,1,1,1,1,1,*)::x
                                     1

Error: Array specification at (1) has more than 7 dimensions

I'm using these versions: mpiexec --version mpiexec (OpenRTE) 4.1.1

/usr/local/bin/mpirun -> ../Cellar/open-mpi/4.1.1_2/bin/mpirun

gcc --version gcc (Homebrew GCC 11.2.0_1) 11.2.0 Copyright (C) 2021 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

netcdf library version 4.8.1 of Oct 19 2021 02:57:31 nc-config --version netCDF 4.8.1

gcc, netcdf and open-mpi installed with Homebrew.

I'm on Mac Catalina 10.15.7.

Thanks in advance for any help, Ceri

martinvandriel commented 3 years ago

Hi Ceri,

seems like an issue with the mpif.h file on you system. Maybe a workaround could be to use the mpi module instead, by setting INCLUDE_MPI = false in make_axisem.macros.

Other than that, maybe talk to an IT person at your institute, as this appears an issue with your system rather than with axsiem and I can't reproduce it.

Cheers, Martin

cerinunn commented 3 years ago

Hi Martin, Thanks for your help. I got it working with INCLUDE_MPI = false. I think the problem was an old version of one of the compiler libraries hanging around in the path. For anyone else with a similar problem, I deleted all the compilers I could find and installed everything from scratch with Homebrew. Cheers, Ceri