Add indexer and create simple indexer flow

georgeamccarthy / protein_search

The neural search engine for proteins.

GNU Affero General Public License v3.0

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Add indexer and create simple indexer flow #9

Closed georgeamccarthy closed 3 years ago

georgeamccarthy commented 3 years ago

app.py opens a flow which computes the embeddings for the short protein file (note this file has proteins all of the same length, currently proteins of different lengths are not supported).

proteins.json is created (and not tracked) which stores a mostly human readable collection of documents in the proteins DocumentArray.

.gitignore modified to include DS_store for Mac operating systems and proteins.json because this file will frequently change.

georgeamccarthy commented 3 years ago

@fissoreg not sure why my relative import's not working in the test, can you take a look at it please? :)