Blue Collar Bioinformatics: Scaling variant detection pipelines for whole genome sequencing analysis

georgemarselis / openlava-macosx

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Blue Collar Bioinformatics: Scaling variant detection pipelines for whole genome sequencing analysis #202

Open GoogleCodeExporter opened 9 years ago

GoogleCodeExporter commented 9 years ago

http://bcbio.wordpress.com/2013/05/22/scaling-variant-detection-pipelines-for-wh
ole-genome-sequencing-analysis/

Original issue reported on code.google.com by geo...@marsel.is on 28 May 2013 at 1:51

GoogleCodeExporter commented 9 years ago

Use of simulated data sets to evaluate the fidelity of metagenomic processing 
methods

http://escholarship.org/uc/item/7787q2dq

Original comment by geo...@marsel.is on 28 May 2013 at 1:55

GoogleCodeExporter commented 9 years ago

forward-time simulation tools: 

http://simupop.sourceforge.net/cookbook/pmwiki.php/Main/OtherTools

Original comment by geo...@marsel.is on 28 May 2013 at 1:56

GoogleCodeExporter commented 9 years ago

Genetic Simulation Resources:

http://popmodels.cancercontrol.cancer.gov/gsr/

Original comment by geo...@marsel.is on 28 May 2013 at 1:56

GoogleCodeExporter commented 9 years ago

GWAsimulator: a rapid whole-genome simulation program

http://bioinformatics.oxfordjournals.org/content/24/1/140.long

Original comment by geo...@marsel.is on 28 May 2013 at 1:57

GoogleCodeExporter commented 9 years ago

Simulation of Genomes: A Review
Antonio Carvajal-Rodríguez

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2679650/

Original comment by geo...@marsel.is on 28 May 2013 at 1:57

GoogleCodeExporter commented 9 years ago

Simulated Data for Genomic Selection and Genome-Wide Association Studies Using 
a Combination of Coalescent and Gene Drop Methods

http://www.g3journal.org/content/2/4/425.full

Original comment by geo...@marsel.is on 28 May 2013 at 1:58

GoogleCodeExporter commented 9 years ago

Data Simulation Software For Whole Genome Association And Other Studies In 
Human Genetics

found: http://psb.stanford.edu/psb-online/proceedings/psb06/dudek.pdf

attached.

Original comment by geo...@marsel.is on 28 May 2013 at 2:00

Attachments:

[Data Simulation Software For Whole Genome Association And Other Studies In Human Genetics.pdf](https://storage.googleapis.com/google-code-attachments/openlava-macosx/issue-202/comment-7/Data Simulation Software For Whole Genome Association And Other Studies In Human Genetics.pdf)