SyMBac.phase_contrast_drawing missing in main branch

georgeoshardo / SyMBac

Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.

https://doi.org/10.1186/s12915-022-01453-6

GNU General Public License v2.0

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SyMBac.phase_contrast_drawing missing in main branch #31

Closed kmpape closed 1 year ago

kmpape commented 1 year ago

I fetched your main branch and tried to run your unit test, but the main branch is missing SyMBac.phase_contrast_drawing I see that it is available on the legacy branch. Is one supposed to work with the legacy branch?

Thanks, Idris

PS: I have installed SyMBac via venv and pip3.8, which required following additions: bin/pip3.8 install pytest bin/pip3.8 install numpy==1.23.5 bin/pip3.8 install pyqt5==5.15.9 --config-settings --confirm-license= --verbose

georgeoshardo commented 1 year ago

Sorry - I had missed this issue. Hopefully my reply on your other one has helped. These unit tests will be removed/rewritten in a later commit.