geoschem / geos-chem

GEOS-Chem "Science Codebase" repository. Contains GEOS-Chem science routines, run directory generation scripts, and interface code. This repository is used as a submodule within the GCClassic and GCHP wrappers, as well as in other modeling contexts (external ESMs).
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Simulating the global distribution of SO3 #2470

Open 1392403848 opened 1 week ago

1392403848 commented 1 week ago

Your name

chen

Your affiliation

south china normal university

Please provide a clear and concise description of your question or discussion topic.

How can this problem be resolved?Thank you !

===============================================================================
GEOS-Chem ERROR: LDUST=T but ONLINE DUST AEROSOLS are undefined!
-> at Do_Error_Checks (in GeosCore/input_mod.F90)
===============================================================================

===============================================================================
GEOS-Chem ERROR: Error encountered in "Do_Error_Checks"!
 -> at GC_Init_Extra (in module GeosCore/gc_environment_mod.F90)
===============================================================================

===============================================================================
GEOS-CHEM ERROR: Error encountered in "GC_Init_Extra"!
STOP at  -> at GEOS-Chem (in GeosCore/main.F90)
===============================================================================

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
msulprizio commented 1 week ago

Please upload your relevant run directory files (geoschem_config.yml, GEOS-Chem log file, etc.) so we can better assist you.

1392403848 commented 6 days ago

SO3.zip Thank you very much!

msulprizio commented 6 days ago

Thanks @1392403848. Could you please also upload the complete GEOS-Chem log file?

1392403848 commented 6 days ago

SO3.zip Okay, thank you very much. I can only upload compressed files here, so I added the log file to the SO3 folder and re-compressed and uploaded it again.

msulprizio commented 6 days ago

I think the issue is that you have compiled GEOS-Chem for use with TOMAS as indicated in your log file:

 %%%%% USING TOMAS MICROPHYSICS PACKAGE %%%%%

but the geoschem_config.yml file does not include the TOMAS species -- it seems to be a standard fullchem configuration file.