GEOS-Chem "Science Codebase" repository. Contains GEOS-Chem science routines, run directory generation scripts, and interface code. This repository is used as a submodule within the GCClassic and GCHP wrappers, as well as in other modeling contexts (external ESMs).
China University of Geosciences Beijing或China University of Geosciences
What happened? What did you expect to happen?
I completed the dry-run simulation following the getting started guide. However, when I wanted to download data from the dry-run output, I ran "./download_data.py log.dryrun geoschem+http", but an error was reported:
Traceback (most recent call last):
File "./download_data.py", line 788, in <module>
main()
File "./download_data.py", line 782, in main
download_the_data(parse_args())
File "./download_data.py", line 665, in download_the_data
paths = extract_pathnames_from_log(args)
File "./download_data.py", line 165, in extract_pathnames_from_log
raise ValueError(msg)
ValueError: Could not locate the ExtData folder in your local disk space!
It seems that I am missing a folder named ExtData, but I didn't find any relevant content about ExtData in the getting started guide. I comprehensively searched all my folders and only found a folder named ExtData.rc.templates at the path /home/jyt/GCClassic/src/GEOS-Chem/run/GCHP/, which contains 5 files, namely ExtData.rc.carbon, ExtData.rc.CO2, ExtData.rc.fullchem, ExtData.rc.tagO3 and ExtData.rc.TransportTracers.
I checked the geoschem_config.yml file, and among them:
I tried to change root_data_dir to ExtData.rc.templates, but running "./download_data.py log.dryrun geoschem+http" still reported the same error, which really confused me. I also tried to create a new folder named ExtData, but it didn't work.
Before posting, I found two problem reports that seemed very relevant, but my problem seems to be different from theirs.
So could you give me some suggestions to solve the problem? Thank you very much.
Please attach any relevant configuration and log files.
Thanks for writing @INDjyt. We assume that GEOS-Chem data directories are placed in a folder named ExtData. If one doesn't exist on your system, you can create it, and then re-run the dry-run.
Your name
Jiang Yutong
Your affiliation
China University of Geosciences Beijing或China University of Geosciences
What happened? What did you expect to happen?
I completed the dry-run simulation following the getting started guide. However, when I wanted to download data from the dry-run output, I ran "./download_data.py log.dryrun geoschem+http", but an error was reported:
It seems that I am missing a folder named ExtData, but I didn't find any relevant content about ExtData in the getting started guide. I comprehensively searched all my folders and only found a folder named ExtData.rc.templates at the path /home/jyt/GCClassic/src/GEOS-Chem/run/GCHP/, which contains 5 files, namely ExtData.rc.carbon, ExtData.rc.CO2, ExtData.rc.fullchem, ExtData.rc.tagO3 and ExtData.rc.TransportTracers.
I checked the geoschem_config.yml file, and among them:
What are the steps to reproduce the bug?
I tried to change root_data_dir to ExtData.rc.templates, but running "./download_data.py log.dryrun geoschem+http" still reported the same error, which really confused me. I also tried to create a new folder named ExtData, but it didn't work. Before posting, I found two problem reports that seemed very relevant, but my problem seems to be different from theirs. So could you give me some suggestions to solve the problem? Thank you very much.
Please attach any relevant configuration and log files.
HEMCO_Config.txt HEMCO_Diagn.txt HISTORY.txt log.txt download_data.py.txt download_data.yml.txt geoschem_config.txt HEMCO_Config.rc.txt
What GEOS-Chem version were you using?
14.4.0
What environment were you running GEOS-Chem on?
Personal computer
What compiler and version were you using?
Python 2.7.18
Will you be addressing this bug yourself?
Yes, but I will need some help
In what configuration were you running GEOS-Chem?
GCClassic
What simulation were you running?
Carbon
As what resolution were you running GEOS-Chem?
0.5*0.625
What meterology fields did you use?
GEOS-FP
Additional information
No response