Closed mahendra-mariadassou closed 5 years ago
A partial solution is now available. All Rmd scripts rely on "local" copies of the scripts.
Stable versions of those scripts correspond to release 0.99 of phyloseq-extended (https://github.com/mahendra-mariadassou/phyloseq-extended/releases) and should be copied to lib/ and tools/lib.
FROGS relies on some external dependencies (FileSaver.js) and R code in a github depo that makes it unsuitable for use on clusters that do not allow https connection from their cluster node.
The code should be reworked to depend only on "local" material.