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geraldinepascal / FROGS

FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.
GNU General Public License v3.0
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Manage the empty samples in Cluster_stat #8

Closed fescudie closed 8 years ago

fescudie commented 9 years ago

With an empty sample Cluster_stat raises an exception. This exception is raised by the hierarchical clustering.

fescudie commented 8 years ago

Provide an hierarchical clustering with empty samples has no sense. The empty samples are all neighbor in dendrogram but this is not a reality.

With commit https://github.com/geraldinepascal/FROGS/commit/045e3c36179c6a5d9551c3a1ed9b970382b27d4e the empty samples are excluded from the hierarchical clustering.

fescudie commented 8 years ago

The fix has been merged in master branch.