Create a reader of `skimage.measure.regionprops` output

gerlichlab / gerlib

A library of general-purpose tools, typically for processing or analysis of data from a sequencing and/or imaging experiment

MIT License

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Create a reader of `skimage.measure.regionprops` output #5

Open vreuter opened 1 month ago

vreuter commented 1 month ago

Right now, we immediately convert the mapping that's returned by the regionprops function from skimage to a pandas.DataFrame, and then write that to CSV. We should have a utility that parses the more raw, JSON-like mapping data and/or the CSV table data. This would make the output of this valuable function call then available for use in Scala code equally to in Python code.