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gerlichlab / looptrace

Fork (from EMBL Gitlab) of the looptrace project: https://git.embl.de/grp-ellenberg/looptrace
MIT License
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TODO: test that any failure to extract small spot image for tracing generates expected error, and that results in blackout frame (all zeroes) #229

Open vreuter opened 5 months ago

vreuter commented 5 months ago

SpotPicker.py --> extract_single_roi_img_inmem

See ImageHandler.spot_image_extraction_skip_reasons_json_file

Related to #222 , basically testing for solution