Need to filter out (QC fail) locus-specific spots when centroid of spot is within 1 standard deviation of any border of the ROI

gerlichlab / looptrace

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Need to filter out (QC fail) locus-specific spots when centroid of spot is within 1 standard deviation of any border of the ROI #265

Open vreuter opened 4 months ago

vreuter commented 4 months ago

This should be added as a new column in the enriched traces file, and it should contribute to the (conjunctive) QC pass/fail column (qcPass). This will also be a potential reason to be visualised in #259

vreuter commented 4 months ago

This is already being done, in LabelAndFilterTracesQC, we just need test coverage.