geronimp / enrichM

Toolbox for comparative genomics of MAGs
81 stars 22 forks source link

Pathway-cytoscape #102

Open Taojianchang opened 4 years ago

Taojianchang commented 4 years ago

Hi Joel, thanks for your nice tool. I have completed enrichm pathway and got two .tsv files see attachments. I think they are what you said "Cytoscape-readable metabolic network", but when i put them in the cytoscape, i cann't got any edge, should i use CoNet module of cytoscape to calculate? I know your paper is on ready, it would be nice if there are examples can share now.

metadata.txt network.txt