geronimp / enrichM

Toolbox for comparative genomics of MAGs
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feat(BPA-628): added a boolean for checking ENRICMDB #134

Closed areejalsheikh closed 2 years ago

areejalsheikh commented 2 years ago

Changes in this pull request only affect the classify pipeline with the following new (non-disruptive) behavior:

if --custom_modules is passed as an argument, the pipeline won't check for external database via ENRICHM_DB environment variable and it check for the external DB otherwise.

Tested.

geronimp commented 2 years ago

Thanks Areej