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geronimp / enrichM

Toolbox for comparative genomics of MAGs
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the --suffix option is not writeable #45

Closed TYMichaelsen closed 5 years ago

TYMichaelsen commented 6 years ago

Hi Joel, Very simple and easy to use software, nice!

However, when trying to set the --suffix argument it is non-responsive? In my case the files are .fa and when setting --suffix .fa it prints an error saying no file with suffix .fna was found, irrespective if I use --genome_files or --genome_directory. If this is not a simple bug in the program I will of course start trouble-shooting my own stuff...

Best, Thomas

geronimp commented 6 years ago

Hi Thomas,

Thanks for your interest in EnrichM. Sorry for the late response I missed this one in my inbox! This has been flagged to me before, so I believe you've identifies a small bug with EnrichM, I'll take a look later tonight to fix the problem. Again, sorry for the delay.

Thanks, Joel

TYMichaelsen commented 6 years ago

No problem, fortunately it is fairly manageable to do a work-around for the moment! :) Thomas

geronimp commented 5 years ago

This issue should be fixed in the latest version

geronimp commented 5 years ago

Thanks for the report!