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geronimp / graftM

GraftM - Rapid community profiles from metagenomes
http://geronimp.github.io/graftM/
GNU General Public License v3.0
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Create no tree #270

Closed AroneyS closed 3 years ago

AroneyS commented 3 years ago

Implement graftM create --no-tree, tested by test_create.py/test_create_no_tree Also implemented _taxit_create_no_tree in create.py to generate a refpkg from taxit without a tree.

Also includes conda environment file for testing. All the tests pass in this environment except three diamond tests (test_diamond.py/test_blastp and test_basename, and test_graft.py/test_diamond_translate).