gersteinlab / siglasso

Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood
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Mutational signatures v3 upgrade #2

Closed dalibor49 closed 4 years ago

dalibor49 commented 4 years ago

Hello,

when will siglasso be upgraded to work with mutational signatures v3?

Best regards, Dalibor

ShantaoL commented 4 years ago

Hey Dalibor,

We have updated the package to 1.1, now it supports signatures v3 from COSMIC (there are two set, one for the whole genome, one for exome only). You can check how to use them by ?siglasso