Closed likelet closed 4 years ago
Here is the docs on the required columns, please check this: https://github.com/broadinstitute/getzlab-SignatureAnalyzer/blob/master/docs/generating_mutational_spectra.md
And here is an example maf: https://github.com/broadinstitute/getzlab-SignatureAnalyzer/blob/master/examples/example_luad_maf.tsv
Best,
Shankara
Okay, thanks for your reply.
CMD:
signatureanalyzer processed_latest_1015.maf -n 10 --cosmic cosmic2 --objective poisson
Hi, I have a header named
Tumor_Sample_Barcode
in my maf file and it returns an error like this, how to fix it ? Is there an example maf file provided to test the command and help me to format the input maf file ? thanks