Open MarioPaps opened 3 weeks ago
Hi, TCGAbiolink (https://bioconductor.org/packages/release/bioc/html/TCGAbiolinks.html) is a handful tool to retrieve the gene expression data. Since the gene expression matrix is large, and we are not the legal owner for TCGA data, we do not provide those data matrices. Hopefully this is helpful!
Hello,
Is there a chance you have access to the complete version of the 'ref.csv' file with normalised gene expression values for all patients in TCGA-BRCA project? Or do you know how to build this from TCGA tsv data?