Describe the bug
The data file attached is acceptable for 0.96 but wouldn't be accepted by 1.1. The system will automatically shut down when the file is being uploaded because there are empty lines in the data file. Idep keeps working if some cells for the same gene are missing, but not if there is no any data for certain gene.
To Reproduce
Steps to reproduce the behavior:
Go to 'iDEP1.11'
Click on 'Browse' and upload the file as attached
See error
Expected behavior
Edit the code asking idep to accept the data file with empty rows or cells. We may delete the rows without value first.
gexijin
commented
1 year ago
Describe the bug The data file attached is acceptable for 0.96 but wouldn't be accepted by 1.1. The system will automatically shut down when the file is being uploaded because there are empty lines in the data file. Idep keeps working if some cells for the same gene are missing, but not if there is no any data for certain gene.
To Reproduce Steps to reproduce the behavior:
Expected behavior Edit the code asking idep to accept the data file with empty rows or cells. We may delete the rows without value first.
Screenshots
Additional context
GSE37704_sailfish_genecounts_with_NA.csv