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gexijin / idepGolem

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download the up and down regulated genes in DEG1 #578

Open JianYes opened 11 months ago

JianYes commented 11 months ago

Is your feature request related to a problem? What value do you see this adding? Please describe. There is a downloadable option to download enrichment information for all genes("Results & data"), but not up and down regulated genes themselves, though the user can sort the table for all genes and get those enriched gene ids. Describe the solution you'd like Add option to download the information only for up and down regulated genes based on the parameters selected. Describe alternatives you've considered

Additional context For example, can we add option to download the 1176 up regulated genes and 971 down regulated genes in the plot? This plot comes from "2 groups, human" demo data file. image

EricTulowetzke commented 11 months ago

@gexijin how does this file look like?

Mouse demo data with WT, WT2,NULL, IR,mock deg_sig_genes_DESeq2.csv

JianYes commented 8 months ago

The added download option under the enriched genes for the comparison has the same title(Results & data) as the one on the left side which is for all information of the enrichment. Can we have a title such as "Enriched gene list" for this download option? It will be better if we just include the up and down regulated genes only by removing the unenriched genes.