gf-dcc / data-model

Gray Foundation data model

https://gf-dcc.github.io/data-model/

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Feat/bulk methylation templates #80

Closed anngvu closed 9 months ago

anngvu commented 9 months ago

Close #67: Added templates based on HTAN version, but removed a couple of optional attributes to keep more streamlined.
Also throw in #79: Easier testing, prepare us for new December setup.

github-actions[bot] commented 9 months ago

Test Suite Report

Template Generation

template	result	link
BulkMethylation-seqLevel1	:smile:	template link
BulkMethylation-seqLevel2	:smile:	template link
BulkMethylation-seqLevel3	:smile:	template link
CohortCoreTemplate	:smile:	template link
ImagingLevel2	:smile:	template link
ImagingLevel2Channels	:smile:	template link
ScRNA-seqLevel1	:smile:	template link
ScRNA-seqLevel2	:smile:	template link
ScRNA-seqLevel3	:smile:	template link
ScRNA-seqLevel4	:smile:	template link

Manifest Validation

TODO