Open praveenmoyili opened 4 years ago
First of all can you the logs? would be nice because that is not a lot info there
I have the same problem but maybe it's because that I'm running it on Virtual Machine? help is needed! thank's
ERROR: Command errored out with exit status 1: command: /home/nameless/Jarvis/jarvis_virtualenv/bin/python /home/nameless/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpb2gp_t0x cwd: /tmp/pip-install-nta5jkh1/scipy Complete output (171 lines): lapack_opt_info: lapack_mkl_info: customize UnixCCompiler libraries mkl_rt not found in ['/home/nameless/Jarvis/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu'] NOT AVAILABLE
openblas_lapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/home/nameless/Jarvis/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_clapack_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas,lapack not found in ['/home/nameless/Jarvis/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas,tatlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries lapack_atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib64
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib64
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries tatlas,tatlas not found in /usr/lib/x86_64-linux-gnu
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
customize UnixCCompiler
libraries satlas,satlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries lapack_atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib64
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib64
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries satlas,satlas not found in /usr/lib/x86_64-linux-gnu
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries lapack_atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib64
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib64
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in /usr/lib/x86_64-linux-gnu
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries lapack_atlas not found in /home/nameless/Jarvis/jarvis_virtualenv/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/local/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/local/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib64
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib64
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib
customize UnixCCompiler
libraries f77blas,cblas,atlas not found in /usr/lib/x86_64-linux-gnu
customize UnixCCompiler
libraries lapack_atlas not found in /usr/lib/x86_64-linux-gnu
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
lapack_info:
customize UnixCCompiler
libraries lapack not found in ['/home/nameless/Jarvis/jarvis_virtualenv/lib', '/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
lapack_src_info:
NOT AVAILABLE
NOT AVAILABLE
setup.py:111: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
import imp
setup.py:386: UserWarning: Unrecognized setuptools command ('dist_info --egg-base /tmp/pip-modern-metadata-l5_ywgou'), proceeding with generating Cython sources and expanding templates
warnings.warn("Unrecognized setuptools command ('{}'), proceeding with "
Running from scipy source directory.
/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/numpy/distutils/system_info.py:624: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/numpy/distutils/system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
self.calc_info()
/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/numpy/distutils/system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
self.calc_info()
Traceback (most recent call last):
File "/home/nameless/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py", line 280, in <module>
main()
File "/home/nameless/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py", line 263, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/home/nameless/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py", line 133, in prepare_metadata_for_build_wheel
return hook(metadata_directory, config_settings)
File "/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/setuptools/build_meta.py", line 157, in prepare_metadata_for_build_wheel
self.run_setup()
File "/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/setuptools/build_meta.py", line 248, in run_setup
super(_BuildMetaLegacyBackend,
File "/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/setuptools/build_meta.py", line 142, in run_setup
exec(compile(code, __file__, 'exec'), locals())
File "setup.py", line 505, in <module>
setup_package()
File "setup.py", line 501, in setup_package
setup(**metadata)
File "/tmp/pip-build-env-biqo5lkr/overlay/lib/python3.8/site-packages/numpy/distutils/core.py", line 135, in setup
config = configuration()
File "setup.py", line 403, in configuration
raise NotFoundError(msg)
numpy.distutils.system_info.NotFoundError: No lapack/blas resources found.
----------------------------------------
ERROR: Command errored out with exit status 1: /home/nameless/Jarvis/jarvis_virtualenv/bin/python /home/nameless/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpb2gp_t0x Check the logs for full command output. Install Python dependencies failed
This is the ERROR that i get
Sounds like this issue https://github.com/scipy/scipy/issues/9005, the solution showed there is to
sudo apt-get install gfortran libopenblas-dev liblapack-dev
sudo pip install scipy
More info can be found in this stackoverflow thread https://stackoverflow.com/questions/7496547/does-python-scipy-need-blas Let me know if it worked
This was the same for me 11Tuvork28 where I was not able to install all the dependencies but I was trying to install this on Kali linux, what I ended up doing was adding the main official Ubuntu repository in addition to the default kali repos but that still didn't work until I used the solution you provided which was to run the folowing commands in terminal
sudo apt-get install gfortran libopenblas-dev liblapack-dev sudo pip install scipy
At this point I was able to build every wheel except for lxml as to which I am still looking for a solution.
Do you have any other suggestions here is the error I got or at least what I could see in terminal and copy:
**411 | PyCode_New(a, 0, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
| ^~~~~~~~~~
ERROR: Failed building wheel for lxml**
**also for scykitlearn, pyaudio... i just couldn't copy all of the error code
Are you still facing the issue? @utawkin2me @WolfsKing-93
Yes
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-------- Original Message -------- On Sep 24, 2020, 2:56 PM, tuvork wrote:
Are you still facing the issue? @utawkin2me @WolfsKing-93
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ERROR: Command errored out with exit status 1: /home/praveen/Jarvis/jarvis_virtualenv/bin/python /home/praveen/Jarvis/jarvis_virtualenv/lib/python3.8/site-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpi03msa_5 Check the logs for full command output. Install Python dependencies failed
Can you please help me ?