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ggloor / q2-aldex2

qiime2 plugin for aldex2 for differential abundance analysis
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aldex2 python version in qiime #16

Open KCBauer opened 2 years ago

KCBauer commented 2 years ago

I have used the aldex plugin for QIIME2 before. However, when I recently tried to access the plug-in, I no longer had it. I opened R in my QIIME2 environment and re-installed. Then, I ran the conda install code. However. I received an error. UnsatisfiableError: The following specifications were found to be incompatible with the existing python installation in your environment:

Specifications:

Your python: python=3.8.8

I am not as familiar with working in terminal. I might try to downgrade my python, but I wondered whether aldex2 works for Python versions later than 3.6. Any advice would be appreciated. @dgiguer

makshuf commented 2 years ago

@KCBauer use the code below to install aldex2, I also had the same issue, this worked for me, pip install git+https://github.com/dgiguer/q2-aldex2.git

Do remember to install git before running this.

HemavathyD commented 2 years ago

Thank you so much

KCBauer commented 2 years ago

Thank you so very much! My apologies for the late reply--this worked brilliantly!

Best, Kylynda

On Wed, Sep 7, 2022 at 4:42 AM makshuf @.***> wrote:

Use the code below to install aldex2, I also had the same issue, this worked for me, pip install git+https://github.com/dgiguer/q2-aldex2.git

Do remember to install git before running this.

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