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ggseg / ggsegExtra

Repository for extra atlases for the ggseg-package
https://ggseg.github.io/ggsegExtra/
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freesurfer dependency #56

Closed butellyn closed 2 years ago

butellyn commented 2 years ago

Hi! The freesurfer package has been removed from CRAN, so it isn't possible to install ggsegExtra at the moment. Do you have a workaround for this?

https://cran.r-project.org/web/packages/freesurfer/index.html

drmowinckels commented 2 years ago

Hi!

neurobase was fixed, so I assumed freesurfer would be too. Seems not, yet. I'e added the freesurfer repo to the ggseg R-universe, which should make install via R-universe work. It will likely take a couple of hours for the build to complete.

If you see freesurfer pop up in these builds, you can have a go at installing via R-universe

https://ggseg.r-universe.dev/ui#builds

# Enable repository from ggseg
 options(repos = c(
 ggseg = 'https://ggseg.r-universe.dev',
 CRAN = 'https://cloud.r-project.org'))
  
 # Download and install ggsegExtra in R
 install.packages('ggsegExtra')
drmowinckels commented 2 years ago

@butellyn have you been able to try? its working on my end.

butellyn commented 2 years ago

It worked! Thank you