Refactor code style

[ghiggi]

Prework

• [x] I understand and agree to this repository's code of conduct.
• [ ] I understand and agree to this repository's contributing guidelines.
• [ ] I have already submitted an issue or discussion thread to discuss my idea with the maintainers.

What kind of change does this PR introduce? (check at least one)

• [ ] Bugfix
• [ ] Feature
• [ ] Documentation
• [ ] Tutorial
• [x] Code style update
• [ ] Refactor
• [ ] Build-related changes
• [ ] Other, please describe:

Does this PR introduce a breaking change? (check one)

• [ ] Yes
• [x] No

If yes, please describe the impact and communicate accordingly:

The PR fulfills these requirements:

• [x] It's submitted to the branch named as follow:
  • Fix a bug: bugfix-<some_key>-<word>
  • Improve the doc: doc-<some_key>-<word>
  • Improve a tutorial tutorial-<some_key>-<word>
  • Add a new feature: feature-<some_key>-<word>
  • Refactor some code: refactor-<some_key>-<word>
  • Optimize some code: optimize-<some_key>-<word>
• [ ] When resolving a specific issue, it's referenced in the PR's title (e.g. fix #xxx[,#xxx], where "xxx" is the issue number)
• [ ] Don't forget to link PR to issue if you are solving one.
• [x] All tests are passing.
• [ ] New/updated tests are included

If adding a new feature, the PR's description includes:

• [ ] A convincing reason for adding this feature (to avoid wasting your time, it's best to open a suggestion issue first and wait for approval before working on it)

Summary

Add several ruff pre-commit rules and fix code to pass the pre-commit checks.

[codecov[bot]]

Codecov Report

Attention: Patch coverage is 88.31325% with 97 lines in your changes are missing coverage. Please review.

Project coverage is 87.86%. Comparing base (03a7204) to head (21548d4).

Files	Patch %	Lines
gpm/visualization/profile.py	0.00%	15 Missing :warning:
gpm/dataset/crs.py	75.92%	13 Missing :warning:
gpm/dataset/conventions.py	42.85%	8 Missing :warning:
gpm/utils/checks.py	85.36%	6 Missing :warning:
gpm/io/local.py	64.28%	5 Missing :warning:
gpm/retrievals/routines.py	0.00%	5 Missing :warning:
gpm/tests/utils/hdf5.py	0.00%	5 Missing :warning:
gpm/accessor/methods.py	76.47%	4 Missing :warning:
gpm/dataset/dataset.py	0.00%	4 Missing :warning:
gpm/dataset/datatree.py	20.00%	4 Missing :warning:
... and 16 more

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #53 +/- ## ========================================== + Coverage 87.66% 87.86% +0.19% ========================================== Files 111 111 Lines 10534 10248 -286 ========================================== - Hits 9235 9004 -231 + Misses 1299 1244 -55 ```

:umbrella: View full report in Codecov by Sentry.
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[coveralls]

coverage: 87.861% (+0.2%) from 87.669% when pulling 21548d4785691081f533eb0bb47883a2795106d0 on refactor-code-style into 03a72041e77dd261d44c6980fd0299aee5328ba5 on main.