Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.
I have created a molecule with a nitro group, so there is a positive charge on the nitrogen and a negative charge on the single bonded oxygen. The overall charge of the molecule is zero. When I try to make this into a GAMESS input file, my charges disappear. How can I go about fixing this?
I have created a molecule with a nitro group, so there is a positive charge on the nitrogen and a negative charge on the single bonded oxygen. The overall charge of the molecule is zero. When I try to make this into a GAMESS input file, my charges disappear. How can I go about fixing this?
Reported by: *anonymous