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ghutchis / avogadro

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.
http://avogadro.cc/
GNU General Public License v2.0
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Saving .pdb file does not update coordinates #751

Closed ghutchis closed 8 years ago

ghutchis commented 9 years ago

Hi! I just started to use Avogadro so maybe I'm just missing it. I'm building a molecule piecewise. I've build the pieces in separate files and have copy/paste them into 1 file to put them together and get their new coordinates. However, the .pdb that is saved from that overall file (with all of the pieces) does not save all of the different coordinates. It just saves the first piece copied into the file. How can I save my overall file to include all of the coordinates?

Reported by: desposrj

ghutchis commented 9 years ago

I have also tried other ways to save this file. Such as, selecting each piece, inverting the selection, deleting the rest of the molecule and just saving each piece that way. It still only saves the .pdb of the first piece copied.

Original comment by: desposrj