giannimonaco
commented
1 year ago Hi, I am not sure about this issue. Did you also try to run the QC on the original FCS file (not the one exported by flowJo)? Did you also try other files?
On Thu, Jan 26, 2023 at 8:51 PM Quang Nguyen @.***> wrote:
Hi there,
Thanks for the tool.
I ran flow_auto_qc() on untransformed FCS files (directly exported from FlowJo), but encountered the error below. Would you mind helping me troubleshoot?
Thank you.
export_F37_Live_flowAIresQC <- flow_auto_qc(F37_LiveSinglets_FCS)
Error in FUN(X[[i]], ...) :
'export_F37_Live.fcs' is not a valid file
session_info()
─ Session info ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
setting value
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date 2023-01-26
rstudio 2022.12.0+353 Elsbeth Geranium (desktop)
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[1] /Users/clusteredatom/Library/R/arm64/4.2/library
[2] /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library
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Hi there,
Thanks for the tool.
I ran
flow_auto_qc()on untransformed FCS files (directly exported from FlowJo), but encountered the error below. Would you mind helping me troubleshoot?Thank you.