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giesselmann
/
STRique
Nanopore raw signal repeat detection pipeline
MIT License
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Error in index
#35
HLHsieh
closed
1 year ago
1
Failed STRique test
#34
wormbro1
closed
1 year ago
3
STRique not providing results after 24 hours
#33
fanavarro
closed
1 year ago
1
Error STRique count
#32
Cesco16
closed
1 year ago
2
RuntimeError: dictionary keys changed during iteration
#31
woodoo46
opened
2 years ago
1
repeat_contig.tsv file
#30
vmscmams
closed
2 years ago
2
VBZ fast5 results in failure to read fast5
#29
mattdmem
opened
3 years ago
2
STRique model version R10.3
#28
yufernando
opened
3 years ago
3
Test after installation failed
#27
rckeerthivasan
closed
3 years ago
2
Documentation for Fast5Masker (expansion request)
#26
ChristianJP
closed
3 years ago
1
ValueError: RepeatCounter: Target with name (21.13723577) already defined
#25
ligiamateiu
closed
3 years ago
9
ImportError: cannot import name 'pyseqan' from 'STRique_lib'
#24
sabiqali
closed
3 years ago
4
ModuleNotFoundError: No module named 'ont_fast5_api'
#23
Tine-dk
closed
3 years ago
1
Issues related to native DNA
#22
s-t-calus
closed
2 years ago
1
the strique can't stop
#21
renzilin
closed
3 years ago
5
Distinguish between AAAAT and GAAAT
#20
TheresaLueth
opened
4 years ago
2
Interpretation of results from STRique
#19
bharathramh
closed
2 years ago
3
STRique
#18
tcarlile
closed
4 years ago
2
No target found
#17
idahoijer
closed
4 years ago
4
command plot is not recognised
#16
BCArg
closed
4 years ago
5
Two issues to run STRique
#15
liuqianhn
closed
4 years ago
4
Dealing with concatemers
#14
mattdmem
opened
4 years ago
2
Plot output using Docker
#13
eblester
closed
4 years ago
8
Definitions of the output fields?
#12
tchrisboles
closed
4 years ago
1
Paper?
#11
woodoo46
closed
4 years ago
2
wrong repeat unit
#10
woodoo46
closed
4 years ago
1
repeat number 0
#9
gmoneyomics
opened
5 years ago
2
prefix/suffix in repeat_config.tsv
#8
woodoo46
closed
5 years ago
2
will Error parsing alignment affect results?
#7
liutiming
closed
4 years ago
10
Explanation needed for model files
#6
liutiming
closed
4 years ago
4
runtime is several hours
#5
rainwala
closed
5 years ago
4
Empty STRique output
#4
MaestSi
closed
5 years ago
15
Error Reading fast5
#3
mattdmem
closed
5 years ago
5
NameError: name 'super' is not defined
#2
gmoneyomics
closed
5 years ago
9
Installation issue?
#1
satomimitsuhashi
closed
5 years ago
3