Open nellykan opened 4 years ago
It's hard to tell without more logs. Can you exit preprocess.py
at here and check if there is any error from the elmo_embed
step?
I got the assertion error when I tried running preprocess.py
with the output to overwrite on an existing folder. I got this Output directory ./DeepLigand/1st_try exists! Overwrite? (yes/no)
, I typed yes
and then I run into the assertion error. However, when I tried to run it specifying as -o a new directory, it ran smoothly.
Hi! I tried to run the preprocess.py with some data however I get this error:
./test.pep.token contains all files from batch1 to batch94 but the files that should have been generated by elmo_embed.py seem to be missing. Do you have any idea why that is?
Thanks!