tcaceresm
commented
3 months ago At least on Ubuntu Linux, that problem is solved by installing libopenbabel-dev
Open CLUES-Emory opened 3 months ago
tcaceresm
commented
3 months ago At least on Ubuntu Linux, that problem is solved by installing libopenbabel-dev
Hello, I am attempting to install ChemmineOB in R from Bioconductor, but I keep running into the following error message:
ChemmineOB.cpp:1569:10: fatal error: 'openbabel/obutil.h' file not found
include <openbabel/obutil.h>
1 error generated. make: *** [ChemmineOB.o] Error 1 ERROR: compilation failed for package ‘ChemmineOB’
I am on MacOS, and install OpenBabel using Conda. Session info is below. Thanks!!
R version 4.3.3 (2024-02-29) Platform: aarch64-apple-darwin20 (64-bit) Running under: macOS Monterey 12.5
Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0
locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: America/New_York tzcode source: internal
attached base packages: [1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached): [1] BiocManager_1.30.22 compiler_4.3.3 tools_4.3.3 rstudioapi_0.15.0