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girke-lab / signatureSearch

R/Bioconductor package including the Gene Expression Signature Search (GESS), Function Enrichment Analysis (FEA) methods and supporting drug-target network construction for visualization
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Error while loading package #16

Open g-pires opened 11 months ago

g-pires commented 11 months ago

Hi,

Whenever i try to load (or use) signatureSearch, I get the following error : Error in completeSubclasses(classDef2, class1, obj, where) : tentative d'obtenir le slot "subclasses" d'un objet d'une classe élémentaire ("NULL") sans slots Erreur : .onLoad a échoué dans loadNamespace() pour 'dbplyr', détails : appel : setClass(cl, contains = c(prevClass, "VIRTUAL"), where = where) erreur : erreur dans les classes contenues ("character") pour la classe "ident" ; Définition de classe éliminées pour 'dbplyr' Do you know where it can come from ? I looked at your DESCRIPTION file and there is no package called dbplyr, but it is imported by BiocFileCache which is a dependency of ExperimentHub which you import in your package.

Thank you, Regards

tgirke commented 11 months ago

Seems like an install problem. Try to follow the steps recommended here. First, make sure you are running >=R-4.3.0 and then install Bioc-3.17. After the base install of Bioc, install signatureSearch with BiocManager::install(...)