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gjospin / PhyloSift

Phylogenetic and taxonomic analysis for genomes and metagenomes
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Grinder.pm missing... #485

Open jamesabbott opened 6 years ago

jamesabbott commented 6 years ago

Hello,

I've just installed v1.0.1 for one of our users from the tarball, but on testing the scripts in bin/, grinder fails since it can't load Grinder.pm. According to the grinder script it is trying to load the module from the bin directory, however there is no Grinder.pm anywhere within the installation tree.

Is grinder a deprecated component, or should this be working?

Thanks James

ghost commented 6 years ago

is the following link working? I tried wget followed by the link, it says "Unable to resolve host address" http://edhar.genomecenter.ucdavis.edu/~koadman/phylosift/phylosift_latest.tar.bz2

Then I tried cloning the phylosift git respository and it worked. But when I ran phylosift command, it says "Can't locate App/Cmd/Setup.pm in @inc"