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gjuggler / ggphylo

Phylogenetic plots for R and ggplot
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Error: processing vignette 'ggphylo.Rnw' failed with diagnostics: #5

Closed tboonf closed 12 years ago

tboonf commented 12 years ago

HI,

When attempting to install ggphylo using install_github('ggphylo', 'gjuggler')

I received the error message: Error: processing vignette 'ggphylo.Rnw' failed with diagnostics: chunk 7 (label = phylo5) Error in coord_polar(expand = F, theta = "y") : unused argument(s) (expand = F) Execution halted

Does anyone know what might be the issue?

Thanks, :)

gjuggler commented 12 years ago

Ah, yeah — that's an error in the ggplot options. Do you know what version of ggplot you have installed? It looks like the 'expand' argument was added to the coord_polar function in version 0.7 (https://github.com/hadley/ggplot2/blob/master/NEWS#L1389) but it may have been subsequently removed.

I haven't played with ggphylo for awhile now. I'll have a look this weekend and get it (at the very least) building again.

tboonf commented 12 years ago

Hey Greg,

I was using version 2_0.9.2.1. Thank you for looking into it.

cheers, b

gjuggler commented 12 years ago

Hey — let me know how this works for you. I haven't done much in R for awhile now, so I'm a bit rusty here. But removing the expand=T argument worked for me, at least.