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gkno / gkno_launcher

The gkno launcher for executing tools or pipelines
MIT License
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Multiple parameter sets - Version 2 update #24

Closed AlistairNWard closed 9 years ago

AlistairNWard commented 9 years ago

Reimplement capability to handle user input of multiple sets of parameters, leading to multiple executions of the pipeline.

AlistairNWard commented 9 years ago

Completed. This is no longer handled by a specific request to generate multiple runs of gkno requiring a specific format json file. Simply adding multiple files to the command line will achieve this effect. For example, if aligning with bwa, supplying a file containing a list of the first mates, a file containing a list of second mates and lists of desired options will run bwa multiple times - once for each set of values.