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glasgowcompbio / PALS

Ranking metabolite (and other omics sets) by their activity levels via SVD
https://pals.glasgowcompbio.org
MIT License
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Add fold change or PLAGE score to PALS Viewer #35

Open joewandy opened 4 years ago

joewandy commented 4 years ago

Justin suggested, when analysing motifs or molecular families, we can compute the fold changes or the PLAGE score. This could be displayed to users.

Not sure if it makes sense in the context of pathways.

RonanDaly commented 4 years ago

Tried to do this before (you might remember code that I had left in near the svd, but wasn't able (at the time) to come up with something that made sense (as an average e.g.)