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glasgowcompbio / vimms

A programmable and modular LC/MS simulator in Python
MIT License
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Initial ms1 scan of 1 peak #269

Open joewandy opened 1 year ago

joewandy commented 1 year ago

It appears that an initial MS1 scan of exactly 1 peak is always inserted at the start of a simulated run. I can't remember why we do this, but maybe it's something that can be removed now.

image
mcbrider5002 commented 1 year ago

@joewandy I think the matching is built around this behaviour too... I might need to change things a bit if it's not like this on the real machine...

EDIT: Actually, it might be self-correcting with the resynchronisation... I don't think we're running any non-simulated comparisons involving the resynchronisation and I can't see any reason why one would run on the real machine without it, so I guess it might be fine?