Detecting synteny blocks among multiple genomes?

glennhickey / progressiveCactus

Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules

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Detecting synteny blocks among multiple genomes? #134

Open aminakur opened 1 year ago

aminakur commented 1 year ago

I am wondering is it possible to extract from the Hal file blocks of synteny shared between several genomes, not just two? Seems like halSynteny only allows comparing two genomes.