glennhickey / progressiveCactus

Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules
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can't zoom in on alignments in browser #80

Open tdlong opened 7 years ago

tdlong commented 7 years ago

I am representing a set of alignments. For some reason when I zoom in I get a

"HAL get blocks error: Exception caught:..."

https://genome.ucsc.edu/cgi-bin/hgTracks?hgS_doOtherUser=submit&hgS_otherUserName=tdlong%40uci.edu&hgS_otherUserSessionName=HALerror

Should I have specified a set of lods when running "runProgressiveCactus.sh --maxThreads 64", oddly I have always been able to zoom in before.

more lod.txt 0 dspr.hal 12934 lod/dspr_lod_146.hal 32558 lod/dspr_lod_365.hal 81395 lod/dspr_lod_913.hal 203599 lod/dspr_lod_2283.hal 509109 lod/dspr_lod_5709.hal 1273107 lod/dspr_lod_14273.hal 3182879 max