Closed seltmann closed 2 years ago
Upon looking at the Bee Library, the data provided does not include associations and is largely only skeletal records (scientific name). @seltmann check with data provider regarding plan for serving association data.
@seltmann Just updated the ipt url to point to the dwca instead. thanks for catching this.
great! thanks!
@jhpoelen I noticed that for LACM the present IPT address is: http://ipt.vertnet.org:8080/ipt/resource.do?r=lacm_ento
But the link to the archive version is: http://ipt.vertnet.org:8080/ipt/archive.do?r=lacm_ento&v=5.4
Does the globi.json need to be configured directly to the .zip file? Or is the present configuration correct?
When performing the review using elton/generate-report.sh I get this error associated with the collection. Perhaps this is useful information:
creating review [globalbioticinteractions/lacm-lacmec]... org.eol.globi.data.StudyImporterException: failed to read archive [https://github.com/globalbioticinteractions/lacm-lacmec/archive/216b0e456b1974cdc52b455a403346db9b6fe875.zip] at org.eol.globi.data.DatasetImporterForDwCA.importStudy(DatasetImporterForDwCA.java:202) at org.eol.globi.util.DatasetImportUtil.importDataset(DatasetImportUtil.java:65) at org.globalbioticinteractions.elton.cmd.CmdReview.review(CmdReview.java:154) at org.globalbioticinteractions.elton.cmd.CmdReview.reviewCachedOrRemote(CmdReview.java:116) at org.globalbioticinteractions.elton.cmd.CmdReview.run(CmdReview.java:107) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:15) at org.globalbioticinteractions.elton.cmd.CmdLine.run(CmdLine.java:24) at org.globalbioticinteractions.elton.Elton.main(Elton.java:15) Caused by: java.io.IOException: failed to read [file:/var/folders/f5/3g3m9l7s1qb6jync48jwg_c00000gn/T/dwca15806223113564775130tmp.zip] at org.globalbioticinteractions.dataset.DwCAUtil.archiveFor(DwCAUtil.java:29) at org.eol.globi.data.DatasetImporterForDwCA.importStudy(DatasetImporterForDwCA.java:175) ... 7 more Caused by: org.gbif.dwc.UnsupportedArchiveException: Parts of DwC-A are missing at org.gbif.dwc.Archive.validate(Archive.java:157) at org.gbif.dwc.DwcFiles.fromCompressed(DwcFiles.java:75) at org.globalbioticinteractions.dataset.DwCAUtil.archiveFor(DwCAUtil.java:24) ... 8 more